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This cottage cheese mac and cheese is a high protein pasta recipe made with a delicious creamy cheese sauce and elbow macaroni pasta. All you need is a few simple ingredients, and 20 minutes, making busy weeknights a breeze!

cottage cheese mac and cheese in a bowl with a spoon

What Makes This High Protein Mac and Cheese Recipe Great

Today, I've got another cottage cheese recipe for you, and like all of the others, it's a simple recipe that's packed with protein! Classic mac and cheese is a favorite comfort food, but the boxed version isn't the healthiest, and I like finding an easy way to sneak in protein (for myself and the kids!). Enter, High Protein Cottage Cheese Macaroni & Cheese

This homemade version features a super easy, cheesy sauce made with creamy cottage cheese blended and mixed into a blend of parmesan and cheddar cheeses and spices. It's then tossed with gluten-free (or regular) elbow macaroni and served topped with a little black pepper and shredded cheese. 

The best part? This high protein mac and cheese has 17 grams of protein per serving! Serve with a side salad or veggies. A quick and easy recipe the whole family will enjoy! 

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Ingredient Notes

recipe ingredients in small bowls and labeled.
  • gluten-free pasta: You can use elbow pasta or another favorite type of pasta shape. If you're not gluten-free, feel free to use regular pasta. 
  • butter
  • gluten-free 1:1 flour: I like King Arthur Baking brand.
  • unsweetened almond milk: Or regular whole milk or low-fat milk.
  • salt
  • pepper
  • garlic powder
  • onion powder
  • ground mustard
  • cottage cheese: You can use non-fat, low-fat, or full-fat cottage cheese. 
  • shredded cheddar cheese: You can use sharp cheddar cheese or mild, depending on your preference. I used pre-shredded cheese, but you can also grate a block if preferred. 
  • parmesan cheese

Step-by-Step Instructions

numbered step by step photos showing how to make the sauce

Step 1

Blend cottage cheese in a blender or food processor until you reach a smooth, creamy texture. Set aside.

Step 2

Heat a large pot of lightly salted water over medium-high heat until boiling. Add pasta to the boiling water and cook according to package instructions drain. For al dente pasta, cook for a minute less. Melt the butter in a large deep skillet over medium heat. Add the gluten-free flour and whisk to form a roux.

Step 3

Slowly pour in the milk and continue whisking over medium heat. 

Step 4

Add in the salt, pepper, garlic powder, onion powder, and mustard powder. Continue whisking until it bubbles and thickens, about 5 mins. 

numbered step by step photos showing how to incorporate the sauce and pasta

Step 5

Turn off the heat. Stir in the shredded cheddar, blended cottage cheese mixture, and parmesan. Whisk until smooth. 

Step 6

Whisk until smooth. 

Step 7

Add in the cooked pasta.

Step 8

Stir and serve topped with a little more shredded cheddar and black pepper.

an overhead shot of a large pot of cottage cheese mac and cheese

Expert Tips

  • Pasta: Feel free to use your favorite gluten-free pasta- chickpea pasta will add even more protein if you're looking for an extra boost. If you're not gluten-free, use your favorite regular pasta of choice. 
  • Dairy-Free: I haven't found any vegan cottage cheese alternatives, but if you're looking for a dairy-free version, use vegan butter, dairy-free cheese shreds, Kite Hill cream cheese (instead of cottage cheese), and plant-based milk. 

Storage Tips

Store leftovers in an airtight container in the refrigerator for up to 3-4 days. Reheat in the microwave or over the stovetop with some butter or milk. 

protein mac and cheese in a bowl with a fork

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5 from 7 votes

Easy High Protein Cottage Cheese Mac and Cheese

Prep: 5 minutes
Cook: 15 minutes
Total: 20 minutes
Yield: 6 servings
This cottage cheese mac and cheese is a high protein pasta recipe made with a delicious creamy cheese sauce and elbow macaroni pasta. All you need is a few simple ingredients, and 20 minutes, making busy weeknights a breeze!
Save this recipe!
Get this sent to your inbox, plus get new recipes from us every week!

Equipment

Ingredients 

  • 12 oz gluten free elbow pasta
  • 3 tbsp butter
  • 3 tbsp gluten free 1:1 flour , I like King Arthur Baking brand
  • 2 cups unsweetened almond milk, or regular low-fat milk
  • ½ tsp salt
  • ½ tsp pepper
  • 1 tsp garlic powder
  • 1 tsp onion powder
  • 1 tsp ground mustard
  • 1 cup cottage cheese
  • 1 cup shredded cheddar cheese
  • ¼ cup parmesan cheese

Instructions 

  • Blend the cottage cheese in a blender until smooth. Set aside.
  • Cook pasta according to package directions and drain.
  • Melt the butter in a large deep skillet over medium heat. Add the gluten free flour and whisk to form a roux.
  • Slowly pour in the milk and continue whisking over medium heat.
  • Add in the salt, pepper, garlic powder, onion powder, and mustard powder. Continue whisking until it bubbles and thickens, about 5 mins.
  • Turn off the heat. Stir in the shredded cheddar, blended cottage cheese and parmesan. Whisk until smooth.
  • Add in the cooked pasta. Serve topped with a little more shredded cheddar and black pepper.

Notes

Expert Tips

    • Pasta: Feel free to use your favorite gluten-free pasta- chickpea pasta will add even more protein if you're looking for an extra boost. If you're not gluten-free, use your favorite regular pasta of choice. 
    • Dairy-Free: I haven't tried any vegan cottage cheese alternatives, but if you're looking for a dairy-free version, use vegan butter, dairy-free cheese shreds, 1 tub Kite Hill cream cheese, and plant-based milk. 
    • Nutrition facts are for ⅙ of the total recipe.

Storage Tips

Store leftovers in an airtight container in the refrigerator for up to 3-4 days. Reheat in the microwave or over the stovetop with some butter or milk. 

Nutrition

Calories: 394kcal | Carbohydrates: 47g | Protein: 17g | Fat: 16g | Saturated Fat: 9g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 4g | Trans Fat: 0.2g | Cholesterol: 38mg | Sodium: 722mg | Potassium: 66mg | Fiber: 2g | Sugar: 1g | Vitamin A: 413IU | Vitamin C: 0.1mg | Calcium: 313mg | Iron: 1mg

All nutrition facts are an estimate and automatically calculated. While I fact check them using My Fitness Pal, please note that they may not always be 100% accurate and depend on ingredients used. Weigh your total and divide by the number of servings for the most accurate grams per serving size.

Did you make this?Rate & comment below, and tag me on Instagram @maryswholelife

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15 Comments

  1. Heather says:

    WOW, this is SO good! Dare I say some of the best mac & cheese I’ve ever had? Creamy, delicious, and you can’t even tell there’s cottage cheese in it! Will definitely be my go to mac & cheese recipe!

    1. Mary says:

      Thank you Heather!

  2. Rachael M. says:

    The best! Husband had seconds before the kids could. 😂

    1. Mary says:

      Amazing!

  3. Christine says:

    I made this last night before we all headed out for sports activities and warmed it over the stove top when we got home – it was so good! The sauce is so creamy and flavorful, you’d never know there was cottage cheese in it

    1. Mary says:

      Thanks Christine!

  4. ubaTaeCJ says:

    ubaTaeCJ

  5. Katie says:

    This is my new go to Mac and cheese recipe! Love the added protein!

    1. Mary says:

      Thank you!!

  6. Erica says:

    The serving size? Is the 17g protein for whole recipe or serving?
    And please keep posting the protein GF recipes😊

    1. Mary says:

      Hi! I didn’t measure out the serving size, but the 17g of protein and nutrition info is for 1/6 of the total recipe. It makes 6 servings total. Hope that makes sense!

  7. Melissa says:

    This is my favorite recipe you’ve made and that’s saying a lot because you can do no wrong. Protein Mac & cheese? So delicious and not heavy!! Thank you for this. 

    1. Mary says:

      Thank you so much!!

  8. Kelly says:

    I made this last night for dinner. Only change I made was adding a bunch of chopped broccolini to the pasta. It was delicious! Definitely will be on the dinner rotation moving forward. Thanks for another great recipe Mary!!

    1. Mary says:

      Thank you!!!